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CRG Viral Beacon - Variant Query

Enabled by data from

Direct query

position reference > alternate

8977 G > T

Query by type

position variant_type*

8977 ALL

8977 SNP

Query by type - Specific

position reference > variant_type*

8977 G > INS

position variant_type* > alternate

8977 DEL > G


*SNP, INS, DEL or ALL

Filters

Metadata Filters

Sample type

platform

platform model

host sex

host age

Clear

Collection Date

Geo origin

dataset

bioproject ID

sample ID

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Variant Annotation Variant Frequency per Dataset
Type Ref. Alt. gene region effect functional class locus name locus id aminoacid change ENA-Illumina ENA-ONT ENA-Consensus

Results plots (Loading...)

Frequency tracking (Loading...)

Metadata

frequency per run host age host sex geo origin dataset disease sample type collection date platform run id bioproject accession sample id JBrowse strain id
(# of results: 0)

Results plots

Make a query with results to generate the plots.

Frequency tracking

Make a query with results to generate the plots.

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